flybrain-connectome — Interactive Demo

🧠 Real Connectome Anchor

Grounded in the real Drosophila MaleCNS connectome: 166,700 neurons / 124,177,617 synapses (Xu et al. 2020, Neuron).

🔍 PROV-JSON Provenance

Every edge carries W3C PROV-JSON provenance — the same standard EU AI Act auditors expect. Audit any topology with flybrain audit.

🛠️ MCP-Native

36 tools callable from Claude, Cursor, or any MCP client. Drop-in for agent workflows.

Modules

Agents

Nodes

Edges

predictive_coding_v2

Blueprint

📊 Interactive Topology — predictive_coding_v2 (5 modules × 8 agents)

Open Fullscreen View JSON

⚡ 5-Minute Quickstart

# 1. Clone & install
git clone https://github.com/lm203688/flybrain-connectome.git
cd flybrain-connectome
pip install -e ".[dev]"

# 2. Generate a showcase organism (one command)
flybrain demo

# 3. Audit any topology for structural integrity
flybrain audit flybrain-connectome-mcp/generated_organisms/demo_predictive_coding_v2_m5_a8.json